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dismo (version 0.8-17)
Species distribution modeling
Description
Functions for species distribution modeling, that is, predicting entire geographic distributions form occurrences at a number of sites.
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Install
install.packages('dismo')
Monthly Downloads
9,181
Version
0.8-17
License
GPL (>= 3)
Maintainer
Robert Hijmans
Last Published
July 12th, 2013
Functions in dismo (0.8-17)
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ecocrop
Ecocrop model
ModelEvaluation
Class "ModelEvaluation"
gbm.step
gbm step
mahal
Mahalanobis model
gbm.plot
gbm plot
gbm.simplify
gbm simplify
pointValues
point values
plot
Plot predictor values
pwdSample
Pair-wise distance sampling
voronoi
Voronoi polygons
mess
Multivariate environmental similarity surfaces (MESS)
DistModel
Class "DistModel"
InvDistW
Inverse-distance weighted model
evaluateROCR
Model testing with the ROCR package
density
density
pairs
Pair plots
biovars
bioclimatic variables
domain
Domain
Random null model
Random null model
gbm.holdout
gbm holdout
randomPoints
Random points
dismo-package
Species distribution modeling
bioclim
Bioclim
gridSample
Stratified regular sample on a grid
acaule
Solanum acaule data
Circles
Circles range
Convex Hull
Convex hull model
dcEvaluate
Evaluate by distance class
ecolim
Ecolim model
biogeomancer
Georeferencing
geocode
Georeferencing with Google
nicheEquivalency
Niche equivalency
gbm.interactions
gbm interactions
nicheOverlap
Niche overlap
lookup
lookup
kfold
k-fold partitioning
Voronoi Hull
Voronoi hull model
maxent
Maxent
predict
Distribution model predictions
calc.deviance
Calculate deviance
gmap
Get a Google map
threshold
Find a threshold
gbm.plot.fits
gbm plot fitted values
evaluate
Model evaluation
prepareData
Prepare data for model fitting
Geographic Distance
Geographic distance model
gbm.perspec
gbm perspective plot
gbif
Data from GBIF
ssb
Spatial sorting bias
Anguilla data
Anguilla australis distribution data
Evaluation plots
Plot model evaluation data
boxplot
Box plot of model evaluation data
response
response plots
gbm.fixed
gbm fixed