dismo v1.1-1

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by Robert Hijmans

Species Distribution Modeling

Functions for species distribution modeling, that is, predicting entire geographic distributions form occurrences at a number of sites and the environment at these sites.

Functions in dismo

Name Description
acaule Solanum acaule data
density density
CirclesRange Circles range
dismo-package Species distribution modeling
calc.deviance Calculate deviance
boxplot Box plot of model evaluation data
biovars bioclimatic variables
Convex Hull Convex hull model
bioclim Bioclim
dcEvaluate Evaluate by distance class
Anguilla data Anguilla australis distribution data
ecocrop Ecocrop model
domain Domain
ecolim Ecolim model
evaluateROCR Model testing with the ROCR package
gbm.fixed gbm fixed
gbm.holdout gbm holdout
DistModel Class "DistModel"
gbif Data from GBIF
evaluate Model evaluation
gbm.plot.fits gbm plot fitted values
gbm.perspec gbm perspective plot
gbm.interactions gbm interactions
gmap Get a Google map
gbm.step gbm step
Geographic Distance Geographic distance model
gbm.simplify gbm simplify
InvDistW Inverse-distance weighted model
gbm.plot gbm plot
geocode Georeferencing with Google
mahal Mahalanobis model
pairs Pair plots
Random null model Random null model
gridSample Stratified regular sample on a grid
kfold k-fold partitioning
mess Multivariate environmental similarity surfaces (MESS)
ModelEvaluation Class "ModelEvaluation"
nicheEquivalency Niche equivalency
nicheOverlap Niche overlap
maxent Maxent
plot Plot predictor values
randomPoints Random points
prepareData Prepare data for model fitting
Evaluation plots Plot model evaluation data
pointValues point values
response response plots
ssb Spatial sorting bias
Rectangular Hull Rectangular hull model
predict Distribution model predictions
pwdSample Pair-wise distance sampling
voronoi Voronoi polygons
threshold Find a threshold
Voronoi Hull Voronoi hull model
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Details

Type Package
Date 2016-6-15
License GPL (>= 3)
LazyLoad yes
NeedsCompilation yes
Packaged 2016-06-15 20:02:45 UTC; rhijmans
Repository CRAN
Date/Publication 2016-06-16 05:28:23

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