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distory (version 1.4.4)

Distance Between Phylogenetic Histories

Description

Geodesic distance between phylogenetic trees and associated functions. The theoretical background of 'distory' is published in Billera et al. (2001) "Geometry of the space of phylogenetic trees." .

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Version

Install

install.packages('distory')

Monthly Downloads

366

Version

1.4.4

License

BSD_3_clause + file LICENSE

Maintainer

Emmanuel Paradis

Last Published

April 19th, 2020

Functions in distory (1.4.4)

distory-package

Distance Between Phylogenetic Histories
dist.multiPhylo

Geodesic Distance Between Phylogenetic Trees
mcmc.target.seq

Find MCMC Target Sequence
orthant.boundary.tree

Orthant Boundary Tree
gromov.hyperbolicity

Gromov Hyperbolicity Constant
bin.multiPhylo

Bin Trees
bethe.tree

Bethe Tree
position.leverage

Position Leverage
phylo.diff

Differences Between Phylogenetic Trees