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diveMove (version 1.1)

Dive analysis and calibration

Description

Utilities to represent, visualize, filter, analyse, and summarize time-depth recorder (TDR) data. Miscellaneous functions for handling location data are also provided.

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Version

Install

install.packages('diveMove')

Monthly Downloads

296

Version

1.1

License

GPL-3

Maintainer

Sebastian Luque

Last Published

August 5th, 2010

Functions in diveMove (1.1)

TDR-class

Classes "TDR" and "TDRspeed" for representing TDR information
diveMove-internal

Internal diveMove Functions
plotTDR-methods

Methods for plotting objects of class "TDR", "TDRspeed", and "TDRcalibrate"
bouts2MLE

Maximum Likelihood Model of mixture of 2 Poisson Processes
extractDive-methods

Extract Dives from "TDR" or "TDRcalibrate" Objects
readTDR

Read comma-delimited file with "TDR" data
diveMove-package

Dive Analysis and Calibration
TDRcalibrate-class

Class "TDRcalibrate" for dive analysis
detDive-internal

Detect dives from depth readings
timeBudget-methods

Describe the Time Budget of Major Activities from "TDRcalibrate" object.
bouts2NLS

Fit mixture of 2 Poisson Processes to Log Frequency data
TDRcalibrate-accessors

Methods to Show and Extract Basic Information from "TDRcalibrate" Objects
bout-methods

Methods for Plotting and Extracting the Bout Ending Criterion
bout-misc

Fit a Broken Stick Model on Log Frequency Data for identification of bouts of behaviour
calibrateDepth

Calibrate Depth and Generate a "TDRcalibrate" object
dives

Sample of TDR data from a fur seal
distSpeed

Calculate distance and speed between locations
rqPlot

Plot of quantile regression for speed calibrations
austFilter

Filter satellite locations
sealLocs

Ringed and Gray Seal ARGOS Satellite Location Data
TDR-accessors

Coerce, Extractor, and Replacement methods for class "TDR" objects
calibrateSpeed

Calibrate and build a "TDRcalibrate" object
readLocs

Read comma-delimited file with location data
plotTD

Interactive plotting and zero-offset correction windows for "TDR" data
diveStats

Per-dive statistics
detPhase-internal

Detect phases of activity from depth readings
labDive-internal

Internal Functions used for Detection of Dives