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diveMove (version 1.2.1)

Dive analysis and calibration

Description

Utilities to represent, visualize, filter, analyse, and summarize time-depth recorder (TDR) data. Miscellaneous functions for handling location data are also provided.

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Version

Install

install.packages('diveMove')

Monthly Downloads

296

Version

1.2.1

License

GPL-3

Maintainer

Sebastian Luque

Last Published

October 6th, 2010

Functions in diveMove (1.2.1)

bout-misc

Fit a Broken Stick Model on Log Frequency Data for identification of bouts of behaviour
extractDive-methods

Extract Dives from "TDR" or "TDRcalibrate" Objects
austFilter

Filter satellite locations
diveModel-class

Class "diveModel" for representing a model for identifying dive phases
calibrateSpeed

Calibrate and build a "TDRcalibrate" object
plotDiveModel-methods

Methods for plotting models of dive phases
detDive-internal

Detect dives from depth readings
TDRcalibrate-accessors

Methods to Show and Extract Basic Information from "TDRcalibrate" Objects
labDive-internal

Internal Functions used for Detection of Dives
bouts2MLE

Maximum Likelihood Model of mixture of 2 Poisson Processes
diveMove-package

Dive Analysis and Calibration
detPhase-internal

Detect phases of activity from depth readings
diveStats

Per-dive statistics
sealLocs

Ringed and Gray Seal ARGOS Satellite Location Data
readTDR

Read comma-delimited file with "TDR" data
dives

Sample of TDR data from a fur seal
TDR-accessors

Coerce, Extractor, and Replacement methods for class "TDR" objects
bouts2NLS

Fit mixture of 2 Poisson Processes to Log Frequency data
TDR-class

Classes "TDR" and "TDRspeed" for representing TDR information
bout-methods

Methods for Plotting and Extracting the Bout Ending Criterion
timeBudget-methods

Describe the Time Budget of Major Activities from "TDRcalibrate" object.
rqPlot

Plot of quantile regression for speed calibrations
readLocs

Read comma-delimited file with location data
diveMove-internal

Internal diveMove Functions
TDRcalibrate-class

Class "TDRcalibrate" for dive analysis
calibrateDepth

Calibrate Depth and Generate a "TDRcalibrate" object
distSpeed

Calculate distance and speed between locations
plotTDR-methods

Methods for plotting objects of class "TDR" and "TDRcalibrate"
bouts3NLS

Fit mixture of 3 Poisson Processes to Log Frequency data
plotZOC-methods

Methods for visually assessing results of ZOC procedure
plotTD

Interactive plotting and zero-offset correction windows for "TDR" data