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diveMove (version 1.3.9)

Dive analysis and calibration

Description

Utilities to represent, visualize, filter, analyse, and summarize time-depth recorder (TDR) data. Miscellaneous functions for handling location data are also provided.

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Version

Install

install.packages('diveMove')

Monthly Downloads

296

Version

1.3.9

License

GPL-3

Maintainer

Sebastian Luque

Last Published

February 20th, 2014

Functions in diveMove (1.3.9)

TDRcalibrate-class

Class "TDRcalibrate" for dive analysis
bout-misc

Fit a Broken Stick Model on Log Frequency Data for identification of bouts of behaviour
TDR-accessors

Coerce, Extractor, and Replacement methods for class "TDR" objects
detPhase-internal

Detect phases of activity from depth readings
bouts2NLS

Fit mixture of 2 Poisson Processes to Log Frequency data
rqPlot

Plot of quantile regression for speed calibrations
bouts3NLS

Fit mixture of 3 Poisson Processes to Log Frequency data
plotZOC-methods

Methods for visually assessing results of ZOC procedure
readLocs

Read comma-delimited file with location data
bout-methods

Methods for Plotting and Extracting the Bout Ending Criterion
detDive-internal

Detect dives from depth readings
bouts2MLE

Maximum Likelihood Model of mixture of 2 Poisson Processes
TDRcalibrate-accessors

Methods to Show and Extract Basic Information from "TDRcalibrate" Objects
timeBudget-methods

Describe the Time Budget of Major Activities from "TDRcalibrate" object.
labDive-internal

Internal Functions used for Detection of Dives
diveMove-internal

Internal diveMove Functions
TDR-class

Classes "TDR" and "TDRspeed" for representing TDR information
diveStats

Per-dive statistics
diveModel-class

Class "diveModel" for representing a model for identifying dive phases
calibrateSpeed

Calibrate and build a "TDRcalibrate" object
plotTDR-methods

Methods for plotting objects of class "TDR" and "TDRcalibrate"
austFilter

Filter satellite locations
diveMove-package

Dive Analysis and Calibration
extractDive-methods

Extract Dives from "TDR" or "TDRcalibrate" Objects
distSpeed

Calculate distance and speed between locations
calibrateDepth

Calibrate Depth and Generate a "TDRcalibrate" object
readTDR

Read comma-delimited file with "TDR" data
plotDiveModel-methods

Methods for plotting models of dive phases
dives

Sample of TDR data from a fur seal
sealLocs

Ringed and Gray Seal ARGOS Satellite Location Data