Usage
profiles.plot(y, col.line, col.fill, xlim=NULL, ymax=NULL, n.br=50, opacity=.5, xlab="Parameter estimate", ylab="Probability density", legend.pos=NULL, with.bar=TRUE, col.bg=NA, lwd=1, lines.on.top=TRUE, ...)
Arguments
y
Data frame, columns of which will be plotted as separate
profiles.
col.line
Vector of colours for the lines.
col.fill
Vector of colours for the fill of the 95% most
probable region of the distribution. If ommited, this will be a
semi-transparent version of col.line.
xlim
X-axis limits - calculated automatically if omitted.
ymax
Y-axis upper limit - calculated automatically if omitted.
n.br
Number of breaks along the range of the data.
opacity
Opacity of the filled region (0 is transparent, 1 is
fully opaque).
xlab,ylab
Axis labels for the plot.
legend.pos
String to pass to legend to position
the legend (for automatic legend building based on the names of
y). with.bar
Should a bar be included that shows the CI ranges
below the plot (in addition to the shading)?
col.bg
Colour to draw behind the profiles (set to "white" for
nicer transparency on non-white backgrounds)
lwd
Width of lines around the profiles
lines.on.top
Draw lines around profiles on top of all profiles?
...
Additional arguments passed through to plot.