dmtools (version 0.2.5)

check_sites: Check sites

Description

Check sites

Usage

check_sites(objs, dataset, col_site)

Arguments

objs

A list of objects.

dataset

A dataset, a type is a data frame.

col_site

A column name of a site in the dataset, without quotes.

Value

A list of objects with a check result.

Examples

# NOT RUN {
site <- c("site 01", "site 02")
id <- c("01", "02")
age <- c("19", "20")
sex <- c("f", "m")
gluc_post <- c("5.5", "4.1")
gluc_res_post <- c("norm", "no")
ast_post <- c("30", "48")
ast_res_post <- c(NA, "norm")

df <- data.frame(
  site, id, age, sex,
  gluc_post, gluc_res_post,
  ast_post, ast_res_post,
  stringsAsFactors = FALSE
)

refs_s01 <- system.file("labs_refer_s01.xlsx", package = "dmtools")
refs_s02 <- system.file("labs_refer_s02.xlsx", package = "dmtools")

s01_lab <- lab(refs_s01, id, age, sex, "norm", "no", site = "site 01")
s02_lab <- lab(refs_s02, id, age, sex, "norm", "no", site = "site 02")

labs <- list(s01_lab, s02_lab)
labs <- check_sites(labs, df, site)
# }