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do3PCA (version 1.0.0)

Probabilistic Phylogenetic Principal Component Analysis

Description

Estimates probabilistic phylogenetic Principal Component Analysis (PCA) and non-phylogenetic probabilistic PCA. Provides methods to implement alternative models of trait evolution including Brownian motion (BM), Ornstein-Uhlenbeck (OU), Early Burst (EB), and Pagel's lambda. Also provides flexible biplot functions.

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Version

Install

install.packages('do3PCA')

Monthly Downloads

168

Version

1.0.0

License

GPL (>= 2.0)

Maintainer

Daniel Caetano

Last Published

September 24th, 2024

Functions in do3PCA (1.0.0)

doBiplot

Make biplot for any type of PCA
ProbPCA

Probabilistic PCA
phylProbPCA

Probabilistic Phylogenetic PCA