sampleCloneMultiGroup

<code>sampleCloneMultiGroup</code> Down-sample clone to specified size 
with one or multiple groups to sample evenly

Provides a set of functions for inferring, visualizing, and analyzing B cell phylogenetic trees.
Provides methods to 1) reconstruct unmutated ancestral sequences,
2) build B cell phylogenetic trees using multiple methods,
3) visualize trees with metadata at the tips,
4) reconstruct intermediate sequences,
5) detect biased ancestor-descendant relationships among metadata types
Workflow examples available at documentation site (see URL).
Citations:
Hoehn et al (2022) <doi:10.1371/journal.pcbi.1009885>,
Hoehn et al (2021) <doi:10.1101/2021.01.06.425648>.

Kenneth Hoehn

dowser

B Cell Receptor Phylogenetics Toolkit

Cole Jensen

Jessie Fielding

Hunter Melton

Susanna Marquez

Jason Vander Heiden

Steven Kleinstein

sampleCloneMultiGroup function

<dl><dt>clone</dt>
<dd>an airrClone object</dd>
<dt>size</dt>
<dd>target size</dd>
<dt>weight</dt>
<dd>column for weighting sample probability</dd>
<dt>group</dt>
<dd>column(s) to sample evenly among group</dd></dl>

Arguments

sampleCloneMultiGroup Down-sample clone to specified size 
with one or multiple groups to sample evenly — sampleCloneMultiGroup

<dl>

<dt>clone</dt>
<dd>an airrClone object</dd>


<dt>size</dt>
<dd>target size</dd>


<dt>weight</dt>
<dd>column for weighting sample probability</dd>


<dt>group</dt>
<dd>column(s) to sample evenly among group</dd>

</dl>

sampleCloneMultiGroup: `sampleCloneMultiGroup` Down-sample clone to specified size with one or multiple groups to sample evenly

Description

Usage

Value

Arguments