dplRCon (version 1.0)

figure.function.concordance: Figure: Plots the Concordances

Description

Plots the concordance indices. This is used to generate the Figure in Concordance: A measure of similarity between matrices of time series with applications in dendroclimatology".

Usage

figure.function.concordance(con.indices, x.lim)

Arguments

con.indices

This is the output generated from the function overall.concordance.period.

x.lim

This is a vector with the start and end year for the required plot.

Value

A figure with the concordance indices and their confidence intervals, a smoother fitted through the indices and the confidence interval for the mean concordance.

Examples

## Not run: 
# #Subset "near-pith" is the material within 0 -20cm from the estimated pith
# spline200.sub0.20.n   <- TruncSeriesPithoffset( ring.raw, ring.stand, dbh.po.nc, c(1,200))
# spline200.sub20.2000.n  <- TruncSeriesPithoffset( ring.raw, ring.stand, dbh.po.nc, c(200,200000))
# boot.0.20   <-  series.bootstrap( spline200.sub0.20.n$sub.series.stand, stat, 999,
#     names.stat, aver.by.tree = FALSE)
# boot.20.2000   <- series.bootstrap(spline200.sub20.2000.n$sub.series.stand, stat, 999,
#    names.stat, aver.by.tree = FALSE)
# 
# overall.precision.HUP <- overall.concordance.period(spline200.sub20.2000.n$sub.series.stand ,
#    spline200.sub0.20.n$sub.series.stand,
#    boot.20.2000$boot.series.mean,  boot.0.20$boot.series.mean ,1 , concordance.indices,
#    c(1880,1999), trim.alpha=0.005, concordance.beta=0.5)
# 
# figure.function.concordance (overall.precision.HUP, x.lim=c(1880,2000))## End(Not run)