oddata

<p>Optical density (OD) data from a 96-well microtiter plate experiment,
growing Escherichia coli cells in M9 medium in a BMG Optima platereader.</p>

datasets

Piecewise linear segmentation of ordered data by a
dynamic programming algorithm. The algorithm was developed for time
series data, e.g. growth curves, and for genome-wide read-count data
from next generation sequencing, but is broadly applicable.
Generic implementations of dynamic programming routines allow
to scan for optimal segmentation parameters and test custom
segmentation criteria ("scoring functions").

Rainer Machne

dpseg

Piecewise Linear Segmentation by Dynamic Programming

Peter F. Stadler

oddata function

<p>A data frame with the measurement time in column 1 and
    bacterial growth data (or blanks) in
    <code>2:ncol(oddata)</code>. Column names correspond to the well on
    the microtiter plate.</p>

oddata: Escherichia coli growth curves.

Description

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Format