getTransitionMatrix.dmm

Evaluate the transition matrix of the DMM at a given position

Performs the drifting Markov models (DMM) which are
non-homogeneous Markov models designed for modeling the heterogeneities of
sequences in a more flexible way than homogeneous Markov chains or even
hidden Markov models. In this context, we developed an R package dedicated to
the estimation, simulation and the exact computation of associated reliability
of drifting Markov models. The implemented methods are described in
Vergne, N. (2008), <doi:10.2202/1544-6115.1326> and
Barbu, V.S., Vergne, N. (2019) <doi:10.1007/s11009-018-9682-8> .

Nicolas Vergne

drimmR

Estimation, Simulation and Reliability of Drifting Markov Models

Corentin Lothodé

Alexandre Seiller

Victor Mataigne

Arnaud Lefebvre

Annthomy Gilles

getTransitionMatrix.dmm function

<dl><dt>x</dt>
<dd>An object of class <code>dmm</code></dd>
<dt>pos</dt>
<dd>A positive integer giving the position along the sequence on which the transition matrix of the DMM should be computed</dd></dl>

Arguments

Victor Mataigne, Alexandre Seiller

Author

Get transition matrix of the drifting Markov Model — getTransitionMatrix.dmm

<dl>

<dt>x</dt>
<dd>An object of class <code>dmm</code></dd>


<dt>pos</dt>
<dd>A positive integer giving the position along the sequence on which the transition matrix of the DMM should be computed</dd>

</dl>

getTransitionMatrix.dmm: Get transition matrix of the drifting Markov Model

Description

Usage

Value

Arguments

Author

References

See Also

Examples