title: "DrugHelper: Identification and correction of drug names database" output: html_document: keep_md: true
Introduction to Drughelper
Drughelper is an R package to identify and correct some drug names of the user's interest in order to easily work with them. Drughelper is constantly updating its dataset (once a month) from Chembl's database.
Installation
Drughelper can be installed from CRAN repository:
install.packages("drughelper")
Scripts
checkDrugSynonym: Main function of the proyect which the user will work with.downloadAbsentFile: Downloads the drug dataset where the search is performed. This function is optional, otherwisecheckDrugSynonymalso downloads the dataset if it is not found in the current directory.formattingDrugName: A function which corrects a bad input for a drug name and returns the synonyms of the corrected name drug.AuxFunctions: Internal functions performed in order to build the dataset.
Data
Data with drugs and synonyms from ChEMBl: dhdrugs.RData. It is downloaded through downloadAbsentFile function.
Information:
Information of the columns from dhdrugs.RData:
- Drug: Name of each chosen drug.
- DrugHelperid: Identification code created for the project.
- Chemblid: Identification code from ChEMBL database.
- formula: molecular formula for each drug.
- maxphase: Clinical phase in which each drug is in.
- synonyms: All drug synonyms for each drug.
- synonymsformatted: Drug synonyms without punctuation marks or spaces.
- canonical: Canonical formula/structure of each drug.