gsa_label

P53 NCI-60 data set provided by Subramanian et al., (2005). A list with phenotypes vector and a vector of sample label values.

Dynamic slicing is a method designed for dependency detection between a categorical variable and a continuous variable. It could be applied for non-parametric hypothesis testing and gene set enrichment analysis.

Chao Ye

dslice

Dynamic Slicing

Bo Jiang

gsa_label function

A list on the following 2 variables.<dl>
 <dt><code>pheotype</code></dt>
<dd>a character vector contains two genotypes.</dd> <dt><code>value</code></dt>
<dd>a numeric vector contains sample label 0 and 1, where 0 and 1 stands for ``MUT'' and ``WT'', respectively.</dd> 
</dl>

Format

Sample labels in gene set analysis — gsa_label

A list on the following 2 variables.<dl>
 <dt><code>pheotype</code></dt>
<dd>a character vector contains two genotypes.</dd>

 <dt><code>value</code></dt>
<dd>a numeric vector contains sample label 0 and 1, where 0 and 1 stands for ``MUT'' and ``WT'', respectively.</dd>

 
</dl>

gsa_label: Sample labels in gene set analysis

Description

Usage

Arguments

Format

References

Examples