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dti (version 0.9-2.1)

Analysis of diffusion weighted imaging (DWI) data

Description

Diffusion Weighted Imaging is a Magnetic Resonance Imaging modality, that measures diffusion of water in tissues like the human brain. The package contains R-functions to process diffusion-weighted data in the context of the diffusion tensor model (DTI). This includes the calculation of anisotropy measures and, most important, the implementation of our structural adaptive smoothing algorithm as described in K. Tabelow, J. Polzehl, V. Spokoiny, and H.U. Voss, Diffusion Tensor Imaging: Structural Adaptive Smoothing, Neuroimage 39(4), 1763-1773 (2008) and J. Polzehl, K. Tabelow, Structure adaptive smoothing Diffusion Tensor Imaging data: the R Package dti Journal of Statistical Software, 31, 1-24 (2009). Additionally the package contains (still experimental) code for the analysis of high angular resolution diffusion weighted imaging (HARDI) data and fiber tracking.

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Version

Install

install.packages('dti')

Monthly Downloads

225

Version

0.9-2.1

License

GPL (>= 2)

Maintainer

Karsten Tabelow

Last Published

July 24th, 2010

Functions in dti (0.9-2.1)

extract-methods

Methods for Function `extract' and `[' in Package `dti'
dwiQball-methods

Methods for Function `dwiQball' in Package `dti'
medinria

Read/Write Diffusion Tensor Data from/to NIFTI File
print-methods

Methods for Function `print' in Package `dti'
polyeder

Polyeders derived from the Icosahedron (icosa0) by sequential triangulation of surface triangles
readDWIdata

Read Diffusion Weighted Data
dti.smooth-methods

Methods for Function `dti.smooth' in Package `dti'
colqFA

FA map color scheme
show3d-methods

Methods for Function `show3d' in Package `dti'
summary-methods

Methods for Function `summary' in Package `dti'
sdpar-methods

Methods for Function `sdpar' in Package `dti'
dtiIndices-methods

Methods for Function `dtiIndices' in Package `dti'
dtiTensor-methods

Methods for Function `dtiTensor' in Package `dti'
dwiMixtensor-methods

Methods for Function `dwiMixtensor' in Package `dti'
dwi-class

Class "dwi"
plot-methods

Methods for Function `plot' in Package `dti'
show-methods

Methods for Function `show' in Package `dti'
dti-package

DTI Analysis
tracking-methods

Methods for Function `tracking' in Package `dti'
dwiMixtensor.old-methods

Methods for Function `dwiMixtensor' in Package `dti'