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dti (version 1.2-0.1)

dwiSqrtODF-methods: Methods for positive definite EAP and ODF estimation in Package dti

Description

Compute a positive definite estimate of the Ensemble Average Propagator (EAP) and Orientation Density Function (ODF) using the approach of Cjeng et. al (2012).

Usage

## S3 method for class 'dtiData':
dwiSqrtODF(object,what="sqrtODF",order=4,forder=1,lambda=0,D0=1.4e-3)

Arguments

object
Object of class "dtiData"
what
Character, currently only "sqrtODF" is possible
order
Even integer, Order of spherical harmonics approximation.
forder
Integer, Order of radial approximation.
lambda
Non-negative, Regularization parameter.
D0
Numeric vector, grid of diffusivity parameters, typically about 1e-3.

References

J. Cheng, T. Jiang and R. Deriche. Nonnegative Definite EAP and ODF Estimation via a Unified Multi-Shell HARDI Reconstruction, MICCAI 2012.

See Also

dtiData, readDWIdata, dtiData, dwiQball