dtwSat (version 0.1.0)

plotPath: Plotting paths of dtwSat object

Description

Method for plotting the minimum paths in the cost matrix of Time-Weighted DTW

Usage

plotPath(x, normalize = FALSE, n.alignments = NULL, show.dist = FALSE, shift = c(-4, -1))

Arguments

x

An dtwSat-class object

normalize

Plot normalized distance. Default is FALSE

n.alignments

A vector. The alignment indices to plot. NULL will plot all possible alignments

show.dist

Display dtw distance for each alignment

shift

A vector of length 2. These values shift the position of the text in x and y, respectively. Argument used with show.dist

Value

object of class ggplot

See Also

dtwSat, plotAlignment, plotClassify, and plotCostMatrix

Examples

names(query.list)
alig = dtwSat(query.list[["Soybean"]], template, weight = "logistic",
       alpha = 0.1, beta = 100, n.alignments = 4, keep = TRUE)
gp = plotPath(alig, normalize=TRUE, show.dist = TRUE)
gp