dupRadar (version 1.2.2)

getDupMatBin: Helper function used in getBinDuplication and getBinRpkMean

Description

getDupMatBin get a subset of the matrix for values in a specific bin defined by the upper bound p and stepSize

Usage

getDupMatBin(p, stepSize = 0.05, value = "allCounts", DupMat)

Arguments

p

The vector of bins

stepSize

The window size

value

The column to be subset

DupMat

The duplication matrix calculated by analyzeDuprates

Value

• The subseted matrix