dupRadar (version 1.2.2)

getRpkBinReadCountFraction: Helper function used in readcountExpressionBoxplot

Description

readcountExpressionBoxplot Calculates the fraction of total reads in a vector of bins

Usage

getRpkBinReadCountFraction(p, stepSize = stepSize, DupMat = DupMat)

Arguments

p

The vector of bins

stepSize

The window size

DupMat

The duplication matrix calculated by analyzeDuprates

Value

• The fraction of total reads in a vector of bins