plot_gold_expression

Visualise the expression of the gold standard over simulation time

A novel, multi-modal simulation engine for
studying dynamic cellular processes at single-cell resolution. 'dyngen'
is more flexible than current single-cell simulation engines. It
allows better method development and benchmarking, thereby stimulating
development and testing of novel computational methods. Cannoodt et
al. (2021) <doi:10.1038/s41467-021-24152-2>.

Robrecht Cannoodt

dyngen

A Multi-Modal Simulator for Spearheading Single-Cell Omics
Analyses

Wouter Saelens

plot_gold_expression function

<dl><dt>model</dt>
<dd>A dyngen intermediary model for which the simulations have been run with <code>generate_gold_standard()</code>.</dd>
<dt>what</dt>
<dd>Which molecule types to visualise.</dd>
<dt>label_changing</dt>
<dd>Whether or not to add a label next to changing molecules.</dd></dl>

Arguments

Visualise the expression of the gold standard over simulation time — plot_gold_expression

<dl>

<dt>model</dt>
<dd>A dyngen intermediary model for which the simulations have been run with <code>generate_gold_standard()</code>.</dd>


<dt>what</dt>
<dd>Which molecule types to visualise.</dd>


<dt>label_changing</dt>
<dd>Whether or not to add a label next to changing molecules.</dd>

</dl>

plot_gold_expression: Visualise the expression of the gold standard over simulation time

Description

Usage

Value

Arguments

Examples