node_IC_zhou

Computes the information content for each node in a directed graph according
to the equation developed by Zhou et al. (2008).

A tool for the preparation and enrichment of health datasets for analysis (Toner et al. (2023) <doi:10.1093/gigascience/giad030>). Provides functionality for assessing data quality and for improving the reliability and machine interpretability of a dataset.
'eHDPrep' also enables semantic enrichment of a dataset where metavariables are discovered from the relationships between input variables determined from user-provided ontologies.

Ian Overton

eHDPrep

Quality Control and Semantic Enrichment of Datasets

Tom Toner

node_IC_zhou function

<dl><dt>graph</dt>
<dd><code>tidygraph</code> directed graph.</dd>
<dt>mode</dt>
<dd>Character constant specifying the directionality of the edges.
One of "in" or "out".</dd>
<dt>root</dt>
<dd>name of root node identifier in column 1 to calculate node depth
from.</dd>
<dt>k</dt>
<dd>numeric value to adjust the weight of the two items of information
content equation (relative number of hyponyms/descendants and relative node
depth). Default = 0.5</dd></dl>

Arguments

Calculate Node Information Content (Zhou et al 2008 method) — node_IC_zhou

<dl>

<dt>graph</dt>
<dd><code>tidygraph</code> directed graph.</dd>


<dt>mode</dt>
<dd>Character constant specifying the directionality of the edges.
One of "in" or "out".</dd>


<dt>root</dt>
<dd>name of root node identifier in column 1 to calculate node depth
from.</dd>


<dt>k</dt>
<dd>numeric value to adjust the weight of the two items of information
content equation (relative number of hyponyms/descendants and relative node
depth). Default = 0.5</dd>

</dl>

node_IC_zhou: Calculate Node Information Content (Zhou et al 2008 method)

Description

Usage

Value

Arguments

References

Examples