eNetXplorer (version 1.1.2)

summary: generates list of model statistics

Description

This function generates a standard list of model statistics. For each alpha, it contains the best value of lambda (obtained by maximizing a quality function over out-of-bag instances), the corresponding maximum value of the quality function, and the model significance (p-value based on comparison to permutation null models).

Usage

# S3 method for eNetXplorer
summary(object, …)

Arguments

object

eNetXplorer object.

…

Additional parameters.

Value

alpha

Vector of alpha values.

best_lambda

Best lambda obtained by maximization of the quality function.

model_QF_est

Maximum of the quality function.

QF_model_vs_null_pval

P-value from model vs null comparison to assess statistical significance.

See Also

eNetXplorer

Examples

# NOT RUN {
data(QuickStartEx)
fit = eNetXplorer(x=QuickStartEx$predictor,y=QuickStartEx$response,
family="gaussian",n_run=20,n_perm_null=10,seed=111)
summary(fit)
# }