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eSDM (version 0.4.4)

Ensemble Tool for Predictions from Species Distribution Models

Description

A tool which allows users to create and evaluate ensembles of species distribution model (SDM) predictions. Functionality is offered through R functions or a GUI (R Shiny app). This tool can assist users in identifying spatial uncertainties and making informed conservation and management decisions. The package is further described in Woodman et al (2019) .

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Install

install.packages('eSDM')

Monthly Downloads

233

Version

0.4.4

License

Apache License (== 2)

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Repository

https://github.com/swfsc/eSDM/

Homepage

https://swfsc.github.io/eSDM/

Maintainer

Sam Woodman

Last Published

October 7th, 2024

Functions in eSDM (0.4.4)

ensemble_create

Create ensemble of SDM predictions

Low resolution GSHHG world map

Overlay SDM predictions onto base geometry

Open the eSDM GUI

ensemble_rescale

Rescale SDM predictions

evaluation_metrics

Calculate SDM evaluation metrics

model_abundance

Calculate predicted abundance

pts2poly_centroids

Create polygons from centroid coordinates

pts2poly_vertices

Create polygons from vertex coordinates

Ensemble tool for predictions from Species Distribution Models

Sample SDM density predictions

validation.data

Sample validation data