print.earlyR

<p>further parameters to be passed to other methods (currently not
used)</p>

<p>This method prints the content of <code>earlyR</code> objects.</p>

Implements a simple, likelihood-based estimation of the reproduction number (R0) using a branching process with a Poisson likelihood. This model requires knowledge of the serial interval distribution, and dates of symptom onsets. Infectiousness is determined by weighting R0 by the probability mass function of the serial interval on the corresponding day. It is a simplified version of the model introduced by Cori et al. (2013) <doi:10.1093/aje/kwt133>.

Thibaut Jombart

earlyR

Estimation of Transmissibility in the Early Stages of a Disease
Outbreak

Anne Cori

Pierre Nouvellet

Janetta Skarp

Zhian N. Kamvar

Tim Taylor

print.earlyR function

Print method for earlyR objects — print.earlyR

Print method for earlyR objects

print.earlyR: Print method for earlyR objects

Description

Usage

Arguments