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easyPubMed (version 2.3)

Search and Retrieve Scientific Publication Records from PubMed

Description

Query NCBI Entrez and retrieve PubMed records in XML or text format. Process PubMed records by extracting and aggregating data from selected fields. A large number of records can be easily downloaded via this simple-to-use interface to the NCBI PubMed API.

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Version

Install

install.packages('easyPubMed')

Monthly Downloads

881

Version

2.3

License

GPL-2

Maintainer

Damiano Fantini

Last Published

February 27th, 2017

Functions in easyPubMed (2.3)

get_pubmed_ids

Simple PubMed Record Search
easyPubMed-package

Retrieve and Process Scientific Publication Records from Pubmed
fetch_pubmed_data

Retrieve PubMed Data in XML or TXT Format
table_articles_byAuth

Extract Publication and Affiliation Data from PubMed Records
batch_pubmed_download

Download PubMed Records in XML or TXT Format
custom_grep

Retrieve Text Between XML Tags
trim_address

Trim and Format Address Information
article_to_df

Extract Data from a PubMed Record
articles_to_list

Cast PubMed Data into a List of Articles