list2dt

This function converts a named list with vector values in each element to a
long data.table. The list is first flattened into a single vector, and then
the data.table is created with two columns: one for the name of the original
list element and another for the value.

Provides a comprehensive toolkit for single-cell annotation with the 'CellMarker2.0' database (see Xia Li, Peng Wang, Yunpeng Zhang (2023) <doi: 10.1093/nar/gkac947>). Streamlines biological label assignment in single-cell RNA-seq data and facilitates transcriptomic analysis, including preparation of TCGA<https://portal.gdc.cancer.gov/> and GEO<https://www.ncbi.nlm.nih.gov/geo/> datasets, differential expression analysis and visualization of enrichment analysis results. Additional utility functions support various bioinformatics workflows. See Wei Cui (2024) <doi: 10.1101/2024.09.14.609619> for more details.

Wei Cui

easybio

Comprehensive Single-Cell Annotation and Transcriptomic Analysis
Toolkit

list2dt function

<dl><dt>x</dt>
<dd>A named list where each element contains a vector of values.</dd></dl>

Arguments

Convert a List with Vector Values to a Long Data.table — list2dt

<dl>

<dt>x</dt>
<dd>A named list where each element contains a vector of values.</dd>

</dl>

list2dt: Convert a List with Vector Values to a Long Data.table

Description

Usage

Value

Arguments