setSavedir

This function sets a directory path for saving files, creating the directory if it
does not already exist. The directory path is created with the given arguments, which
are passed directly to <code><a href="/link/file.path()?package=easybio&version=1.1.1" data-mini-rdoc="easybio::file.path()">file.path()</a></code>.

Provides a comprehensive toolkit for single-cell annotation with the 'CellMarker2.0' database (see Xia Li, Peng Wang, Yunpeng Zhang (2023) <doi: 10.1093/nar/gkac947>). Streamlines biological label assignment in single-cell RNA-seq data and facilitates transcriptomic analysis, including preparation of TCGA<https://portal.gdc.cancer.gov/> and GEO<https://www.ncbi.nlm.nih.gov/geo/> datasets, differential expression analysis and visualization of enrichment analysis results. Additional utility functions support various bioinformatics workflows. See Wei Cui (2024) <doi: 10.1101/2024.09.14.609619> for more details.

Wei Cui

easybio

Comprehensive Single-Cell Annotation and Transcriptomic Analysis
Toolkit

setSavedir function

<dl><dt>...</dt>
<dd>Arguments to be passed to <code><a href="/link/file.path()?package=easybio&version=1.1.1" data-mini-rdoc="easybio::file.path()">file.path()</a></code> to construct the directory path.</dd></dl>

Arguments

This function sets a directory path for saving files, creating the directory if it
does not already exist. The directory path is created with the given arguments, which
are passed directly to <code><a href='https://rdrr.io/r/base/file.path.html'>file.path()</a></code>.

Set a Directory for Saving Files — setSavedir

<dl>

<dt>...</dt>
<dd>Arguments to be passed to <code><a href='https://rdrr.io/r/base/file.path.html'>file.path()</a></code> to construct the directory path.</dd>

</dl>

setSavedir: Set a Directory for Saving Files

Description

Usage

Value

Arguments