workIn

This function allows you to perform operations in a specified directory and then
return to the original directory. It is useful when you need to work with files or
directories that are located in a specific location, but you want to return to the
original working directory after the operation is complete.

Provides a comprehensive toolkit for single-cell annotation with the 'CellMarker2.0' database (see Xia Li, Peng Wang, Yunpeng Zhang (2023) <doi: 10.1093/nar/gkac947>). Streamlines biological label assignment in single-cell RNA-seq data and facilitates transcriptomic analysis, including preparation of TCGA<https://portal.gdc.cancer.gov/> and GEO<https://www.ncbi.nlm.nih.gov/geo/> datasets, differential expression analysis and visualization of enrichment analysis results. Additional utility functions support various bioinformatics workflows. See Wei Cui (2024) <doi: 10.1101/2024.09.14.609619> for more details.

Wei Cui

easybio

Comprehensive Single-Cell Annotation and Transcriptomic Analysis
Toolkit

workIn function

<dl><dt>dir</dt>
<dd>The directory path in which to operate. If the directory does not exist,
it will be created recursively.</dd>
<dt>expr</dt>
<dd>An R expression to be evaluated within the specified directory.</dd></dl>

Arguments

Perform Operations in a Specified Directory and Return to the Original Directory — workIn

<dl>

<dt>dir</dt>
<dd>The directory path in which to operate. If the directory does not exist,
it will be created recursively.</dd>


<dt>expr</dt>
<dd>An R expression to be evaluated within the specified directory.</dd>

</dl>

workIn: Perform Operations in a Specified Directory and Return to the Original Directory

Description

Usage

Value

Arguments