compare2-class

<code>compare2-class</code> is used to store the results of multiple comparisons results,
including results for drawing and comparing differences between groups.

Provides a built-in Nemaplex database for nematodes,
which can be used to search for various nematodes.
Also supports various nematode community and functional
analyses such as nematode diversity, maturity index, metabolic footprint,
and functional guild. The methods are based on
<https://shiny.wur.nl/ninja/>, Bongers, T. (1990)
<doi:10.1007/BF00324627>, Ferris, H. (2010)
<doi:10.1016/j.ejsobi.2010.01.003>, Wan, B. et al. (2022)
<doi:10.1016/j.soilbio.2022.108695>, and Van Den Hoogen, J. et al.
(2019) <doi:10.1038/s41586-019-1418-6>.

Wang Kunguang

easynem

Nematode Community Analysis

compare2-class function

<dl>
<dt><code>meta</code></dt>
<dd>A data frame storing basic elements for visualization.</dd></dl>
<dt><code>result</code></dt>
<dd>A data frame of multiple comparisons results.</dd>
<dt><code>temp</code></dt>
<dd>A character vector of the difference comparison.</dd>

Slots

A S4 class to store multiple comparisons results (two-factor). — compare2-class

<dl>
<dt><code>meta</code></dt>
<dd>A data frame storing basic elements for visualization.</dd>


<dt><code>result</code></dt>
<dd>A data frame of multiple comparisons results.</dd>


<dt><code>temp</code></dt>
<dd>A character vector of the difference comparison.</dd>


</dl>

compare2-class: A S4 class to store multiple comparisons results (two-factor).

Description

Arguments

Slots

Details

See Also