mf-class

The <code>mf-class</code> is used to store the results of nematode metabolic footprints analysis.

Provides a built-in Nemaplex database for nematodes,
which can be used to search for various nematodes.
Also supports various nematode community and functional
analyses such as nematode diversity, maturity index, metabolic footprint,
and functional guild. The methods are based on
<https://shiny.wur.nl/ninja/>, Bongers, T. (1990)
<doi:10.1007/BF00324627>, Ferris, H. (2010)
<doi:10.1016/j.ejsobi.2010.01.003>, Wan, B. et al. (2022)
<doi:10.1016/j.soilbio.2022.108695>, and Van Den Hoogen, J. et al.
(2019) <doi:10.1038/s41586-019-1418-6>.

Wang Kunguang

easynem

Nematode Community Analysis

mf-class function

<dl>
<dt><code>result</code></dt>
<dd>A data frame for storing the results of metabolic footprinting analysis.</dd></dl>

Slots

A S4 class to store Metabolic footprints results (single factor) — mf-class

<dl>
<dt><code>result</code></dt>
<dd>A data frame for storing the results of metabolic footprinting analysis.</dd>


</dl>

mf-class: A S4 class to store Metabolic footprints results (single factor)

Description

Arguments

Slots

See Also