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EBS (version 3.1)

Exact Bayesian Segmentation

Description

Performs an exact Bayesian segmentation on data and returns the probabilities of breakpoints, an ICL criteria, comparison of change-point location, etc.

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Version

Install

install.packages('EBS')

Version

3.1

License

GPL (>= 2)

Maintainer

Alice Cleynen

Last Published

June 22nd, 2016

Functions in EBS (3.1)

CompCredibility

Comparison of two profiles with credibility intervals

Generic function

Model Selection by BIC Criterion

Contains funcions that run exact bayesian changepoint methods and return changepoint probabilities and ICL criteria for model selection

Generic function

Number of segmentations in K segments

~~ Methods for Function Col ~~

Prior probability of E0

~~ Methods for Function Data ~~

Matrix of prior values for each interval

Posterior probabilities of the number of segments

EBSPriorProfiles

Matrix of prior values for each interval

Plot distribution of changepoints of one profile

Probability of kth changepoint in a segmentation in K segments

Exact Bayesian Segmentation for Poisson, Negative Binomial and Normal models

Model Selection by Integrated Completed Likelihood criterion

Model Selection by Integrated Completed Likelihood criterion

EBSPlotProbaProfiles

Plot distribution of changepoints of each profile

EBSProfiles-class

Class "EBSProfiles"

Exact Bayesian Segmentation for multiple profiles

getHyperParameters

Generic function

Generic function

getKmax-methods

~~ Methods for Function getKmax ~~

~~ Methods for Function getCol ~~

Statistic for Profile Comparison

getData-methods

~~ Methods for Function getData ~~

getHyperParameters-methods

~~ Methods for Function getHyperParameters ~~

Generic function

Segmentation information for one profile out of the set

getModel-methods

~~ Methods for Function getModel ~~

Generic function

getLength-methods

~~ Methods for Function getLength ~~

getOverdispersion

Generic function

getOverdispersion-methods

~~ Methods for Function getOverdispersion ~~

~~ Methods for Function getP ~~

Generic function

~~ Methods for Function getLi ~~

Generic function

Generic function

Generic function

getVariance-methods

~~ Methods for Function getVariance ~~

HyperParameters

Generic function

Generic function

~~ Methods for Function Kmax ~~

~~ Methods for Function Length ~~

Generic function

HyperParameters-methods

~~ Methods for Function HyperParameters ~~

Generic function

getPriorm-methods

~~ Methods for Function getPriorm ~~

~~ Methods for Function Li ~~

Generic function

Generic function

Generic function

Prior distribution of change-point when uniform prior on segmentation

NbConditions-methods

~~ Methods for Function NbConditions in Package EBS ~~

~~ Methods for Function Priorm ~~

Generic function

Generic function

matProba-methods

~~ Methods for Function matProba ~~

Variance-methods

~~ Methods for Function Variance ~~

Generic function

Generic function

Generic function

Overdispersion-methods

~~ Methods for Function Overdispersion ~~

~~ Methods for Function Model ~~

~~ Methods for Function show in Package methods ~~

Truncated Poisson distribution