The dataset contains the results of applying ecocbo::prep_data() to epiDat. The result is a list with one level: $Results is a data frame with the results of applying PERMANOVA to epiDat a number of times, it contains the values of pseudoF and the mean squares for different repeated sampling efforts.
This dataset can be used to study the variability of the pseudoF-statistic, beta and the power when an experiment is applied to a varying number of samples, sampling units, or sampling sites.
data("simResults")An object of class "ecocbo_data", also a list containing one data frame. The format is:
| $Results | a data frame that contains the results of the evaluation of sim_beta. | |
| dat.sim | simulation from which the results are obtained. | |
| k | number of resample for the result. | |
| m | number of sites considered for the result. | |
| n | number of replicates within each site for the result. | |
| pseudoFH0 | observed F value for the experimental design, when all observations belong to one site. | |
| pseudoFHa | observed F value for the experimental design, when observations belong to different sites. | |
| AMSHa | calculated mean squares among sites in the experiment. | |
| RMSHa | calculated mean squares for the residuals in the experiment. |
This dataset comes from applying ecocbo::prep_data() to the basic data from ecocbo::epiDat.
Guerra-Castro, E. J. et al. 2016. Scales of spatial variation in tropical benthic assemblages and their ecological relevance: epibionts on Caribbean mangrove roots as a model system. – Mar. Ecol. Prog. Ser. 548: 97–110.
data(simResults)
sim_beta(simResults, alpha = 0.05)
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