Learn R Programming
⚠️There's a newer version (2.1.3) of this package.Take me there.

ecodist (version 1.1.0)

Dissimilarity-based functions for ecological analysis

Description

Dissimilarity-based analysis functions including ordination and Mantel test functions, intended for use with spatial and community data.

Copy Link

Version

Install

install.packages('ecodist')

Monthly Downloads

4,252

Version

1.1.0

License

GPL version 2 or newer

Maintainer

Sarah Goslee

Last Published

October 30th, 2023

Functions in ecodist (1.1.0)

bump

Nine-bump spatial pattern
fixdmat

Distance matrix conversion
cor2m

Generates a correlation table between the variables of 2 matrices
permresults

Mantel test results for number of permutations, correlation and dataset size.
corgen

Generate correlated data
pco

Principal coordinates analysis
plotvf

Plots fitted vectors onto an ordination diagram
mgram

Mantel correlogram
lower

Lower-triangular matrix
pmgram

Partial Mantel correlogram
bcdist

Bray-Curtis distance
sitelocation

Grazed site locations
full

Full symmetric matrix
crosstab

Data formatting
vf

Vector fitting
forestpct

Forest landcover data
graze

Grazed vegetation data.
ecodist-package

Dissimilarity-based functions for ecological analysis
distance

Calculate dissimilarity/distance metrics
nmds

Non-metric multidimensional scaling
plotmgram

Plot a Mantel correlogram
nmds.min

Find minimum stress configuration
mantel

Mantel test