ex_counts

<p>Genera found on four human body sites.</p>

datasets

Computes alpha and beta diversity metrics using concurrent 'C' threads.
Metrics include 'UniFrac', Faith's phylogenetic diversity, Bray-Curtis
dissimilarity, Shannon diversity index, and many others.
Also parses newick trees into 'phylo' objects and rarefies feature tables.

Daniel P. Smith

ecodive

Parallel and Memory-Efficient Ecological Diversity Metrics

Alkek Center for Metagenomics and Microbiome Research 

ex_counts function

<p>A matrix of 4 samples (columns) x 6 genera (rows).</p>

ex_counts: Example counts matrix

Description

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