ecolitk (version 1.44.0)

Meta-data and tools for E. coli

Description

Meta-data and tools to work with E. coli. The tools are mostly plotting functions to work with circular genomes. They can used with other genomes/plasmids.

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Version

1.44.0

License

GPL (>= 2)

Maintainer

Laurent Gautier

Last Published

February 15th, 2017

Functions in ecolitk (1.44.0)

ecoligenomeBNUM2MULTIFUN

Environment

gccontent

function to compute gccontent

pointsCircle

Functions to plot circular related figures

polar2xy

Functions to perform polar coordinate related functions

polygonChrom

Functions to plot circular chromosomes informations

ecoli.m52.genome

Escherichia coli data

ecoligenome.operon

Known operon in E.coli - data.frame

multiFun

multiFun classification

ecoligenomeBNUM

Environment for 'bnum' identifiers

wstringapply

Apply a function on a window sliding on a string

linkedmultiget

A function to look for values across linked environments