ecospat.CCV.communityEvaluation.prob
Evaluates community predictions directly on the probabilities (i.e., threshold independent)
Spatial Ecology Miscellaneous Methods
ecospat.CCV.createDataSplitTable
Creates a DataSplitTable for usage in ecospat.ccv.modeling.
ecospat.ESM.EnsembleProjection
Ensamble of Small Models: Projects Calibrated ESMs Into New Space Or Time.
ecospat.CCV.communityEvaluation.bin
Calculates a range of community evaluation metrics based on different thresholding techniques.
Ensamble of Small Models: Calibration of Simple Bivariate Models
Community Evaluation
ecospat.ESM.EnsembleModeling
Ensamble of Small Models: Evaluates and Averages Simple Bivariate Models To ESMs
Pairwise co-occurrence Analysis with calculation of the C-score index.
Runs indivudual species distribuion models with SDMs or ESMs
Produce response plots for ESMs
Thresholds for Ensamble of Small Models
Prediction Mean
SESAM Probability Ranking Rule
Generate Binary Models
Calculate An Adjusted D2
Variable contribution in ESM
Ensamble of Small Models: Projects Simple Bivariate Models Into New Space Or Time
Species Co-Occurrences
Maxent Cross Validation
Cohen's Kappa
Constrained Co-Occurrence Analysis.
Calculate Phylogenetic Diversity Measures
Calculate Boyce Index
Calibration And Evaluation Dataset
Minimum Dispersal Routes)
A climate analogy setection tool for the modeling of species distributions
Maximum TSS
Maxent Variable Importance
Correlation Plot
Minimal Predicted Area
Calculate Niche Overlap
Model Evaluation For A Given Threshold Value
MESS
ecospat.niche.equivalency.test
Niche Equivalency Test
GBM Cross Validation
ecospat.niche.similarity.test
Niche Similarity Test
ecospat.mantel.correlogram
Mantel Correlogram
GLM Cross Validation
Maximum Kappa
Projection of Occurrence Densities to the Geography
Dynamic Occurrence Densities Grid
Plot True skill statistic (TSS)
RandomForest Cross Validation
Test Data For The Niche Dynamics Analysis In The Native Range Of A Hypothetical Species
ecospat.rand.pseudoabsences
Sample Pseudo-Absences
Test Data For The Niche Dynamics Analysis In The Invaded Range Of A Hypothetical Species
Extract occupied patches of a species in geographic space.)
Make Data Frame
Niche Expansion, Stability, and Unfilling
GLM Permutation Function
ecospat.niche.dynIndexProjGeo
Projection of niche dynamic indices to the Geography
Niche Categories and Species Density
Quantification of the range size of a species using habitat suitability maps and IUCN criteria)
ecospat.occ.desaggregation
Species Occurrences Desaggregation
Number Of Predictors
Plot MESS
Reclassifying grids function
Test Tree For The Ecospat package
Test Environmental Rasters for The Ecospat package
ecospat.plot.overlap.test
Plot Overlap Test
Test Data For The Ecospat package
Test Data For The ecospat.mdr function
Test Data For The Niche Overlap Analysis
Plot Variables Contribution
Plot Niche
Draw Centroid Arrows
Sample Environmental Variables
Variation Partitioning For GLM Or GAM
Plot Kappa
Random Ecologically Stratified Sampling of propotional numbers
Random Ecologically Stratified Sampling of equal numbers