ecospat.ESM.EnsembleModeling
Ensemble of Small Models: Evaluates and Averages Simple Bivariate Models To ESMs
ecospat.CCV.createDataSplitTable
Creates a DataSplitTable for usage in ecospat.ccv.modeling.
ecospat.ESM.EnsembleProjection
Ensemble of Small Models: Projects Calibrated ESMs Into New Space Or Time.
ecospat.CCV.communityEvaluation.bin
Calculates a range of community evaluation metrics based on different thresholding techniques.
Spatial Ecology Miscellaneous Methods
ecospat.ESM.EnsembleEvaluation
Ensemble of Small Models: Evaluation via the Pooling procedure
ecospat.CCV.communityEvaluation.prob
Evaluates community predictions directly on the probabilities (i.e., threshold independent)
Runs indivudual species distribuion models with SDMs or ESMs
Community Evaluation
Pairwise co-occurrence Analysis with calculation of the C-score index.
SESAM Probability Ranking Rule
Prediction Mean
Calculate An Adjusted D2
Calculate Boyce Index
Thresholds for Ensemble of Small Models
Generate Binary Models
Produce response plots for ESMs
Variable contribution in ESM
Ensemble of Small Models: Projects Simple Bivariate Models Into New Space Or Time
Ensemble of Small Models: Calibration of Simple Bivariate Models
GBM Cross Validation
Correlation Plot
Calibration And Evaluation Dataset
Calculate Phylogenetic Diversity Measures
Maxent Cross Validation
GLM Cross Validation
Species Co-Occurrences
A climate analogy setection tool for the modeling of species distributions
Maxent Variable Importance
Cohen's Kappa
Constrained Co-Occurrence Analysis.
Maximum Kappa
Dynamic Occurrence Densities Grid
Maximum TSS
Minimum Dispersal Routes)
Delineation of the distribution's margin and its uncertainty
RandomForest Cross Validation
ecospat.mantel.correlogram
Mantel Correlogram
Make Data Frame
MESS
Niche Expansion, Stability, and Unfilling
ecospat.niche.dynIndexProjGeo
Projection of niche dynamic indices to the Geography
Calculate Niche Overlap
ecospat.niche.equivalency.test
Niche Equivalency Test
Niche position and niche breadth)
Niche position and niche breadth)
Plot MESS
Model Evaluation For A Given Threshold Value
Plot Niche
Minimal Predicted Area
GLM Permutation Function
Extract occupied patches of a species in geographic space.)
ecospat.occ.desaggregation
Species Occurrences Desaggregation
Plot Variables Contribution
Plot Kappa
Number Of Predictors
ecospat.poolingEvaluation
Evaluation of species distribution models using the pooling procedure
Plot True skill statistic (TSS)
Random Ecologically Stratified Sampling of equal numbers
Sample Environmental Variables
Test Data For The Ecospat package
ecospat.plot.overlap.test
Plot Overlap Test
Niche Categories and Species Density
Draw Centroid Arrows
Test Environmental Rasters for The Ecospat package
Random Ecologically Stratified Sampling of propotional numbers
Projection of Occurrence Densities to the Geography
ecospat.niche.similarity.test
Niche Similarity Test
Test Data For The Niche Dynamics Analysis In The Native Range Of A Hypothetical Species
Test Data For The ecospat.mdr function
Reclassifying grids function
ecospat.rand.pseudoabsences
Sample Pseudo-Absences
Quantification of the range size of a species using habitat suitability maps and IUCN criteria)
Test Data For The Niche Overlap Analysis
Test Tree For The Ecospat package
Variation Partitioning For GLM Or GAM
Test Data For The Niche Dynamics Analysis In The Invaded Range Of A Hypothetical Species
Test AVS Dataset For The Ecospat package