validDGEList


Check for existence of standard components of DGEList object.


Differential expression analysis of RNA-seq expression profiles with biological replication. Implements a range of statistical methodology based on the negative binomial distributions, including empirical Bayes estimation, exact tests, generalized linear models and quasi-likelihood tests. As well as RNA-seq, it be applied to differential signal analysis of other types of genomic data that produce counts, including ChIP-seq, SAGE and CAGE.

Yunshun Chen

edgeR

Empirical Analysis of Digital Gene Expression Data in R

validDGEList function

Check for existence of standard components of DGEList object.

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validDGEList: Check for Valid DGEList object

Description

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Examples