fasta_to_stockholm

fasta.file

<p>The HMMER binary version for windows does not recognize FASTA files to build the
hmm profile. This function creates a STOCKHOLM file readable by HMMER 3.0</p>

internal

Predicts cytoplasmic effector proteins using genomic data by searching for motifs of interest using regular expression searches and hidden Markov models (HMM) based in Haas et al. (2009) <doi:10.1038/nature08358>.

Javier Tabima

fasta_to_stockholm: Converts FASTA to STOCKHOLM

Description

Usage

Arguments

Value