get_mafft_path

If <code>TRUE</code>, throw an error if MAFFT is not installed.

error

If <code>TRUE</code>, print progress reports.

verbose

Where to look for MAFFT. By default it will look on the search
path.

path

Check if MAFFT is installed and return path to executable

internal

Predicts cytoplasmic effector proteins using genomic data by searching for motifs of interest using regular expression searches and hidden Markov models (HMM) based in Haas et al. (2009) <doi:10.1038/nature08358>.

get_mafft_path: Check if MAFFT is installed and return path

Description

Usage

Arguments

Value