eha v2.8.5

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by Göran Broström View Source

Event History Analysis

Parametric proportional hazards fitting with left truncation and right censoring for common families of distributions, piecewise constant hazards, and discrete models. Parametric accelerated failure time models for left truncated and right censored data. Proportional hazards models for tabular and register data. Sampling of risk sets in Cox regression, selections in the Lexis diagram, bootstrapping. Brostr<c3><b6>m (2012) <doi:10.1201/9781315373942>.

Functions in eha

Name	Description
Lognormal	The Lognormal Distribution
Weibull	The (Cumulative) Hazard Function of a Weibull Distribution
age.window	Age cut of survival data
Pch	The Piecewise Constant Hazards distribution.
Loglogistic	The Loglogistic Distribution
Gompertz	The Gompertz Distribution
aftreg.fit	Parametric proportional hazards regression
aftreg	Accelerated Failure Time Regression
EV	The EV Distribution
SurvSplit	Split a survival object at specified durations.
coxreg	Cox regression
cal.window	Calendar time cut of survival data
frail.fit	Frailty experiment
fert	Marital fertility nineteenth century
import_strata	strata function imported from survival
child	Child mortality, Skellefte<U+00E5>, Sweeden 1850--1900.
logrank	The Log-rank test
import_Surv	Surv function imported from survival
logrye	Rye prices, Scania, southern Sweden, 1801-1894.
coxreg.fit	Cox regression
check.surv	Check the integrity of survival data.
pchreg	Piecewise Constant Proportional Hazards Regression
mlreg	ML proportional hazards regression
plot.phreg	Plots output from a phreg regression
scania	Old age mortality, Scania, southern Sweden, 1813-1894.
risksets	Finds the compositions and sizes of risk sets
check.dist	Graphical goodness-of-fit test
perstat	Period statistics
print.logrank	Prints logrank objects
plot.tpchreg	Plots output from a tpchreg regression
compHaz	Graphical comparison of cumulative hazards
coxfunk	Loglihood function (partial likelihood) of a Cox regression
plot.aftreg	Plots output from an AFT regression
print.phreg	Prints phreg objects
male.mortality	Male mortality in ages 40-60, nineteenth century
table.events	Calculating failure times, risk set sizes and No. of events in each risk set
mort	Male mortality in ages 40-60, nineteenth century
makeham	The Gompertz-Makeham Distribution
eha-package	eha: Event History Analysis
cro	Creates a minimal representation of a data frame.
swepop	Swedish population data, 1968-2019.
infants	Infant mortality and maternal death, Sweeden 1821--1894.
plot.coxreg	Plot method for coxreg objects
join.spells	Straighten up a survival data frame
ltx	LaTeX printing of regression results.
summary.phreg	A summary of phreg objects.
plotHaz	Graphical comparing of cumulative hazards
plot.weibreg	Plots output from a Weibull regression
hazards	Get baseline hazards atoms from fits from
summary.tpchreg	Summary for tpchreg objects
oe	Create an oe object
geome.fit	Constant intensity discrete time proportional hazards
tpchreg	Proportional hazards regression with piecewise constant hazards and tabular data.
oldmort	Old age mortality, Sundsvall, Sweden, 1860-1880.
print.summary.coxreg	Prints summary.coxreg objects
make.communal	Put communals in "fixed" data frame
phreg.fit	Parametric proportional hazards regression
piecewise	Piecewise hazards
plot.logrank	Plots of hazdata objects.
print.summary.phreg	Prints summary.phreg objects
plot.hazdata	Plots of hazdata objects.
weibreg	Weibull Regression
summary.aftreg	Prints aftreg objects
phfunc	Loglihood function of a proportional hazards regression
summary.coxreg	A summary of coxreg objects.
print.risksets	Prints a summary of the content of a set of risk sets.
toBinary	Transforms a "survival" data frame into a data frame suitable for binary (logistic) regression
phreg	Parametric Proportional Hazards Regression
print.aftreg	Prints aftreg objects
toDate	Convert time in years since "0000-01-01" to a date.
print.summary.tpchreg	Prints summary.tpchreg objects
swedeaths	Swedish death data, 1968-2019.
summary.weibreg	Prints a weibreg object
print.summary.aftreg	Prints summary.aftreg objects
print.coxreg	Prints coxreg objects
print.tpchreg	Prints tpchreg objects
weibreg.fit	Weibull regression
wfunk	Loglihood function of a Weibull regression
regtable	Retrieves regression tables
toTime	Calculate duration in years from "0000-01-01" to a given date
print.weibreg	Prints weibreg objects
toTpch	Transform survival data to tabular form
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Vignettes of eha

Name
eha.Rmd
gompertz.Rmd
mybib.bib
parametric.Rmd
parametric1.Rnw
tpchreg.Rmd
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Details

Encoding	UTF-8
Date	2021-01-11
BugReports	https://github.com/goranbrostrom/eha/issues
License	GPL (>= 2)
LazyData	yes
ByteCompile	yes
URL	http://ehar.se/r/eha/
NeedsCompilation	yes
RoxygenNote	7.1.1
VignetteBuilder	knitr, utils
Packaged	2021-01-11 15:19:00 UTC; gobr0002
Repository	CRAN
Date/Publication	2021-01-12 14:30:13 UTC

suggests	bookdown , knitr , rmarkdown
imports	graphics , stats , survival (>= 3.0)
depends	R (>= 3.5.0)
Contributors	Jianming Jin