Learn R Programming
⚠️There's a newer version (1.3.5) of this package.Take me there.

elaborator (version 1.0)

A 'shiny' Application for Exploring Laboratory Data

Description

A novel concept for generating knowledge and gaining insights into laboratory data. You will be able to efficiently and easily explore your laboratory data from different perspectives.

Copy Link

Version

Install

install.packages('elaborator')

Monthly Downloads

283

Version

1.0

License

GPL-3

Maintainer

Steffen Jeske

Last Published

March 16th, 2020

Functions in elaborator (1.0)

elaborator_server

elaborator_server - Server Part of the elaborator application
elaborator_plot_qual_trends

elaborator_plot_qual_trends - creates the qualitative trends plot in the shiny app elaborator
elaborator_transform_transparent

elaborator_transform_transparent - Calculate the transparent version of a given color
elaborator_perform_unlist

elaborator_perform_unlist - function to unlist
elaborator_perform_ttest

elaborator_perform_ttest - performs t-test for changes of a labparameter from one visit to another
elaborator_perform_binomial_test

elaborator_perform_binomial_test - calculates binomial test for the change of a labparameter from one visit to another
launch_elaborator

launch_elaborator - Launches the elaborator application
elaborator_calculate_ref_pattern

elaborator_calculate_ref_pattern - returns a specific row of a combination matrix
elaborator_plot_ref_pattern

elaborator_plot_ref_pattern - create reference-value based pattern plots (only works in shiny applications)
jscode

elaborator_ui - User Interface of the elaborator application
elaborator_plot_quant_trends

elaborator_plot_quant_trends - Function to draw Boxplots for each Treatment and Labparameter
elaborator_calculate_pattern

elaborator_calculate_pattern - function to calculate pattern in ternary respresentation
elaborator_draw_dots

elaborator_draw_dots - Draw a circle in a plot window with specific size/coordinates and colors
elaborator_draw_ref_pattern

elaborator_draw_ref_pattern - create the Reference-value based pattern plots
elaborator_calculate_color_index

elaborator_calculate_color_index - calculates the index of the color vector in the qualitative trends plot
elaborator_draw_curved_line

elaborator_draw_curved_line - Draw a curved line from start to end point
elaborator_draw_boxplot_color

elaborator_draw_boxplot_color - Color preview function
elaborator_calculate_spearman_distance

elaborator_calculate_spearman_distance - function to calculate distance matrix with spearman method
elaborator_calculate_pattern_number

elaborator_calculate_pattern_number - adds one to the pattern for a ternary representation
elaborator_derive_test_values

elaborator_derive_test_values - derives p-values/estimates for sign-test or t-test (by applying functions specified above)