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emdbook (version 1.3.10)

Support Functions and Data for "Ecological Models and Data"

Description

Auxiliary functions and data sets for "Ecological Models and Data", a book presenting maximum likelihood estimation and related topics for ecologists (ISBN 978-0-691-12522-0).

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Version

Install

install.packages('emdbook')

Monthly Downloads

18,752

Version

1.3.10

License

GPL

Maintainer

Ben Bolker

Last Published

May 19th, 2018

Functions in emdbook (1.3.10)

Seed predation data set from Duncan and Duncan 2000

Deprecated (obsolete) functions

Plot highest posterior density region

Negative log-likelihood slice

Superimpose contour lines on a 3D plot

Scientific notation as LaTeX/expression()

Transform coefficients

Calculate Bayesian credible intervals

Mixed chi-squared distributions

Multivariate normal distribution density function

Metropolis-Szymura-Barton algorithm

Zero-inflated negative binomial distribution

Create a list of perturbed parameters

Log-spaced sequence

Plot a 3D surface representing a 2D curve

Graphical grid search in 2D

Lambert W function

Utility functions for mcmc objects

emdbook-package

get.emdbook.packages

install and update auxiliary packages

Myxomatosis titer data

Glacier lily occurrence and fecundity data

Apply a function to a combination of vectors

Data on fir (Abies) life history

Convert WinBUGS output to CODA format

Data on reed frog predation experiments

Goby (reef fish) survivorship data

Reef fish (damselfish) data

Beta-binomial distribution

Delta method functions