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emdbook (version 1.3.11)

Support Functions and Data for "Ecological Models and Data"

Description

Auxiliary functions and data sets for "Ecological Models and Data", a book presenting maximum likelihood estimation and related topics for ecologists (ISBN 978-0-691-12522-0).

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Version

Install

install.packages('emdbook')

Monthly Downloads

6,844

Version

1.3.11

License

GPL

Maintainer

Ben Bolker

Last Published

February 12th, 2019

Functions in emdbook (1.3.11)

Lily

Glacier lily occurrence and fecundity data
as.mcmc.bugs

Convert WinBUGS output to CODA format
apply2d

Apply a function to a combination of vectors
dmvnorm

Multivariate normal distribution density function
dchibarsq

Mixed chi-squared distributions
emdbook-package

emdbook
get.emdbook.packages

install and update auxiliary packages
GobySurvival

Goby (reef fish) survivorship data
Reedfrog

Data on reed frog predation experiments
SeedPred

Seed predation data set from Duncan and Duncan 2000
dzinbinom

Zero-inflated negative binomial distribution
calcslice

Negative log-likelihood slice
lseq

Log-spaced sequence
lump.mcmc.list

Utility functions for mcmc objects
HPDregionplot

Plot highest posterior density region
contour3d

Superimpose contour lines on a 3D plot
metropSB

Metropolis-Szymura-Barton algorithm
perturb.params

Create a list of perturbed parameters
credint

Calculate Bayesian credible intervals
curve3d

Plot a 3D surface representing a 2D curve
scinot

Scientific notation as LaTeX/expression()
trcoef

Transform coefficients
Damselfish

Reef fish (damselfish) data
deltamethod

Delta method functions
deprecated

Deprecated (obsolete) functions
Fir

Data on fir (Abies) life history
gridsearch2d

Graphical grid search in 2D
lambertW

Lambert W function
Myxo

Myxomatosis titer data
dbetabinom

Beta-binomial distribution