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enaR (version 2.9.1)

Tools for Ecological Network Analysis

Description

Provides algorithms for the analysis of ecological networks.

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Version

Install

install.packages('enaR')

Monthly Downloads

17

Version

2.9.1

License

GPL-3

Issues

26

Pull Requests

1

Stars

23

Forks

12

Maintainer

Matthew K Lau

Last Published

August 7th, 2015

Functions in enaR (2.9.1)

bgcModels

Bigeochemical Cycling Models
get.ns

Quick Calculation of a Range of Network Statistics.
enaCycle

Full Cycle Analysis of Ecological Networks
environCentrality

Environ Centrality an Ecological Network
cycliv

Analysis of Feeding Cycles in a Network
enaAll

Conduct All Major ENA
bcratio

Calculates the Ratio of Positive to Negative Elements in a Network
as.extended

Create an Extended Format Matrix
m.list

Sub-set of the Larger Ecosystem Models
force.balance

Repeated Application the Balance Function
enaStructure

Structure Analyses of Ecological Network
enaControl

Control Analyses of Ecological Networks
enaEnviron

Ecological Network Environs
oyster

Intertidal Oyster Reef Ecosystem Model
balance

Balance Flow Network Models
ssCheck

Checks the Balance of Inputs and Outputs from a Network
enaFlow

Flow Analyses of Ecological Networks
TET

Calculates the Total Environ Throughflow for a Ecosystem Network Model
set.orient

Globally Set the Output Matrix Orientation
bal

Subfunction for Balancing by Either Inputs or Outputs
netOrder

Reorder Nodes in a Network in enaR
enaAscendency

Calculates the Ascendency of an Ecological Network
read.wand

Read WAND Formatted Model
as.bipartite

Create a bipartite network.
mExp

Calculates the Exponent of a Matrix
TES

Calculate the Total Environ Storage
scc

Find the Strongly Connected Component (SCC) in a Graph
read.enam

Read ENA Model from an Mdloti Formatted Excel File
structure.statistics

Structural Statistics of an Ecological Network
enaUtility

Utility Analysis of Ecological Networks
troModels

Trophic Models
unpack

"Unpacks" the Network Object into Separate Objects
read.nea

Read NEA Formatted Network Model
enaMTI

Mixed Trophic Impacts (MTI) Analysis
pack

Compile Network Information into a Network Class
enaStorage

Storage Analyses of Ecological Networks
enaModelInfo

Ecosystem Model Information
read.scor

Read SCOR Formatted Model
eigenCentrality

Calculates the Eigen Centrality of a Network
enaR-package

Tools for Ecological Network Analysis (ena)
findPathLength

Cumulative Flow over a Range of Path Lengths
write.EcoNet

Write enaR models to an EcoNet formatted file.
write.nea

Write a Network Object to File Using the NEA Data Format
scifix

Standardizes Scientific Notation from SCOR Formatted Files
enaModels

Ecosystem Models
get.orient

Get the Current Global Matrix Orientation Setting
enaTroAgg

Trophic Aggregations (TroAgg) Analysis