runEnsDbApp

Additional arguments passed to the <code><a href="/link/runApp?package=ensembldb&version=1.4.6&to=shiny" rd-options="shiny" data-mini-rdoc="shiny::runApp">runApp</a></code> function
		from the <code>shiny</code> package.

This function starts the interactive <code>EnsDb</code> shiny web application that
	allows to look up gene/transcript/exon annotations from an <code>EnsDb</code>
	annotation package installed locally.

data

shiny

The package provides functions to create and use
        transcript centric annotation databases/packages. The
        annotation for the databases are directly fetched from Ensembl
        using their Perl API. The functionality and data is similar to
        that of the TxDb packages from the GenomicFeatures package,
        but, in addition to retrieve all gene/transcript models and
        annotations from the database, the ensembldb package provides
        also a filter framework allowing to retrieve annotations for
        specific entries like genes encoded on a chromosome region or
        transcript models of lincRNA genes.

Johannes Rainer

ensembldb

Utilities to create and use an Ensembl based annotation database

runEnsDbApp function

Additional arguments passed to the <code><a href="runApp" rd-options="shiny">runApp</a></code> function
		from the <code>shiny</code> package.

runEnsDbApp: Search annotations interactively

Description

Usage

Arguments

Value

Details

See Also