Methods for objects of type "MCdiversity".
is.MCdiversity(x)
# S3 method for MCdiversity
plot(x, …)
# S3 method for MCdiversity
autoplot(object, col = ggplot2::GeomCol$default_aes$fill,
border = ggplot2::GeomCol$default_aes$colour, …)
# S3 method for MCdiversity
summary(object, …)An object to be tested or plotted.
A MCdiversity object to be summarized or plotted.
The color used to fill the bars. See "Color Specification" in par.
The color of the borders around the bars. See hist.
Additional arguments to be passed to the generic methods.
Meta-community diversity objects are lists containing:
The name of the MetaCommunity object containing inventory data.
The type of diversity ("alpha", "beta" or "gamma").
The order of diversity \(q\).
The estimation bias correction used to calculate diversity.
The phylogenetic or functional tree used to calculate phylodiversity.
Logical. Indicates whether phylodiversity is normalized or proportional to the height of the tree.
A vector containing the weights of communities.
A vector containing the diversity of communities.
The total diversity.
is.MCdiversity returns TRUE if the object is of class MCdiversity. summary.MCdiversity returns a summary of the object's value.