enveomics.R (version 1.9.1)

enve.df2dist.list: Enveomics: Data Frame to Dist (List)

Description

Transform a dataframe (or coercible object, like a table) into a list of dist objects, one per group.

Usage

enve.df2dist.list(
  x,
  groups,
  obj1.index = 1,
  obj2.index = 2,
  dist.index = 3,
  empty.rm = TRUE,
  ...
)

Value

Returns a list of dist objects.

Arguments

x

A dataframe (or coercible object) with at least three columns:

1. ID of the object 1,

2. ID of the object 2, and

3. distance between the two objects.

groups

Named array where the IDs correspond to the object IDs, and the values correspond to the group.

obj1.index

Index of the column containing the ID of the object 1.

obj2.index

Index of the column containing the ID of the object 2.

dist.index

Index of the column containing the distance.

empty.rm

Remove incomplete matrices.

...

Any other parameters supported by enve.df2dist.

Author

Luis M. Rodriguez-R [aut, cre]