enviGCMS (version 0.5.0)

plotrsd: plot the rsd influnces of data in different groups

Description

plot the rsd influnces of data in different groups

Usage

plotrsd(list, ms = c(100, 800), inscf = 5, rsdcf = 100,
  imputation = "l", index = NULL, ...)

Arguments

list

list with data as peaks list, mz, rt and group information

ms

the mass range to plot the data

inscf

Log intensity cutoff for peaks across samples. If any peaks show a intensity higher than the cutoff in any samples, this peaks would not be filtered. default 5

rsdcf

the rsd cutoff of all peaks in all group

imputation

parameters for `getimputation` function method

index

the index of peaks considered, default NULL

...

other parameters for `plot` function

Examples

# NOT RUN {
library(faahKO)
cdfpath <- system.file('cdf', package = 'faahKO')
list <- getmr(cdfpath, pmethod = ' ')
plotrsd(list)
# }